Comprehensive Comparison of Phylogenetic Trees on the Web
Download Visual TreeCmp
TreeCmp is a command line tool written in pure Java, can be download as a zip archive. The following versions of library are available:
- TreeCmp_v1.0-b291.zip - requires Java 1.5 (aka Java 5),
- TreeCmp_v1.1-b308.zip - contains implementation of a new metric - the Matching Pair (MP) distance, requires Java 1.6 (aka Java 6),
- TreeCmp_v2.0-b35.zip - contains implementation of a new metric - the MAST (MT), UMAST (UM) and Cophenetic (CO) distance, requires Java 1.7 (aka Java 7).
Visual TreeCmp is provided together with a short manual.
In order to unpack the file any software supporting zip compression, for example free software 7-zip (http://www.7-zip.org/), can be used.
The Visual TreeCmp application based on Spring framework and can be download as:
For more details about the MS and MC metrics see related pages:
PRTGen - phylogenetic random trees generator: